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D

drawBackbone(VueVARNAGraphics, Point2D.Double[], double, double) - Method in class fr.orsay.lri.varna.VARNAPanel
 
drawBBox(boolean) - Method in class fr.orsay.lri.varna.VARNAPanel
Toggles on/off a rectangular outline of the bounding box.
drawBorder(boolean) - Method in class fr.orsay.lri.varna.VARNAPanel
Toggles on/off a rectangular outline of the border.
drawChemProbAnnotation(VueVARNAGraphics, ChemProbAnnotation, Point2D.Double, double) - Method in class fr.orsay.lri.varna.VARNAPanel
 
drawColorMap(boolean) - Method in class fr.orsay.lri.varna.VARNAPanel
 
drawRegionHighlightsAnnotation(VueVARNAGraphics, Point2D.Double[], Point2D.Double[], double) - Method in class fr.orsay.lri.varna.VARNAPanel
 
drawRNA(String, String) - Method in class fr.orsay.lri.varna.VARNAPanel
Sets the RNA secondary structure to be drawn in this panel, using the default layout algorithm.
drawRNA(RNA, int) - Method in class fr.orsay.lri.varna.VARNAPanel
Sets the RNA secondary structure to be drawn in this panel, using a given layout algorithm.
drawRNA() - Method in class fr.orsay.lri.varna.VARNAPanel
Redraws the current RNA.
drawRNA(RNA) - Method in class fr.orsay.lri.varna.VARNAPanel
Sets the RNA secondary structure to be drawn in this panel, using the current drawing algorithm.
drawRNA(String, String, int) - Method in class fr.orsay.lri.varna.VARNAPanel
Sets the RNA secondary structure to be drawn in this panel, using a given layout algorithm.
drawRNA(Reader, int) - Method in class fr.orsay.lri.varna.VARNAPanel
 
drawRNA(String, String, String, String, int) - Method in class fr.orsay.lri.varna.VARNAPanel
When comparison mode is ON, sets the two RNA secondary structure to be drawn in this panel, using a given layout algorithm.
drawRNAInterpolated(String, String) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using the default drawing algorithm and displays it, using an interpolated transition between the previous one and the new one.
drawRNAInterpolated(String, String, int) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using a given algorithm and displays it, using an interpolated transition between the previous one and the new one.
drawRNAInterpolated(String, String, Mapping) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using the default drawing algorithm and displays it, using an interpolated transition between the previous one and the new one.
drawRNAInterpolated(String, String, int, Mapping) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using a given drawing algorithm and displays it, using an interpolated transition between the previous one and the new one.
drawRNAInterpolated(RNA) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using the default drawing algorithm and displays it, using an interpolated transition between the previous one and the new one.
drawRNAInterpolated(RNA, Mapping) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using the default drawing algorithm and displays it, using an interpolated transition between the previous one and the new one.
drawRNAInterpolated(RNA, int, Mapping) - Method in class fr.orsay.lri.varna.VARNAPanel
Draws a secondary structure of RNA using a given drawing algorithm and displays it, using an interpolated transition between the previous one and the new one.
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