25/02/2009
Added New selection/annotation features, transparent PNGs, region highlights...
VARNA: Visualization Applet for RNA
A Java lightweight component and applet for drawing the RNA secondary structure
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If you find VARNA useful to your research, please contribute to its continued development by citing its supporting manuscript:
VARNA: Interactive drawing and editing of the RNA secondary structure
Kévin Darty, Alain Denise and Yann Ponty
Bioinformatics, pp. 1974-1975, Vol. 25, no. 15, 2009
Kévin Darty, Alain Denise and Yann Ponty
Bioinformatics, pp. 1974-1975, Vol. 25, no. 15, 2009
VARNA now ships in its 3-6 version.
Requirements: A version 1.5+ of the JAVA Virtual Machine (Standalone application version) or plugin (Applet version) is required to run VARNA.
The latest version of the JVM can be found on Sun's JAVA site.
Troubleshooting/Feature request: Please feel free to report any bug and/or feature request,
we will try our best to accommodate your requests.
| Download | Version | Type | File | Size | Description |
|---|---|---|---|---|---|
| VARNA Applet | 3-6 | Binaries | VARNAv3-6.jar | 293kb | Main binary distribution of the VARNA Applet |
| VARNA Sources | 3-6 | Bin/Src | VARNAv3-6-src.jar | 518kb | Binaries/sources bundled distribution of the VARNA Applet |
| VARNA API doc | 3-6 | HTML Files | VARNAv3-6-API.jar | 581kb | Bunch of Javadoc files describing the VARNA Panel component API |
Alternatively, VARNA can be executed directly on your computer through this
JAVA web start version